ABOUT THIS RECORDspecies: Festuca pratensis
miRNA family: miR160d
source: miRNEST
Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCGTGCGAGGAGCCAAGCATG miRNA* TGCCTGGCTCCCTGTATGCCA mismatches: 2 bulges: 0 |
pre-miRNA
ACTTGGGATATGCCTGGCTCCCTGTATGCCACTCGCGTAGCTGCCAACTCGGTTCACCTCCCACCACCGTAGCGTTGGCTCTACCGCGGATGGCGTGCGA
GGAGCCAAGCATGACCATCT
dot-bracket secondary structure
...(((..(((((.(((((((.(((((((((.((((((((..((((((.((((............))))....)))))).))).))))).))))))))).
))))))).))))).)))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
ACTTGGGATATGCCTGGCTCCCTGTATGCCACTCGCGTAGCTGCCAACTCGGTTCACCTCCCACCACCGTAGCGTTGGCTCTACCGCGGATGGCGTGCGA
GGAGCCAAGCATGACCATCT
dot-bracket secondary structure
...(((..(((((.(((((((.(((((((((.((((((((..((((((.((((............))))....)))))).))).))))).))))))))).
))))))).))))).)))...
SIMILARITIES| miRBase tae-MIR160: 8e-27 PMRD tae-miR160: 8e-27 microPC miR160: 1e-19 | UniProt no hits RFAM mir-160: 0.000000000000008 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
