miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Salmo salar, Oncorhynchus mykiss, Osmerus mordax, Oncorhynchus tshawytscha, Oncorhynchus nerka, Thymallus thymallus, Coregonus clupeaformis, Salvelinus fontinalis

ABOUT THIS RECORD

ID: MNEST006850
species: Salmo salar
miRNA family: miR-2985
source: miRNEST

Taxonomy by NCBI:
Salmo salar Salmo Salmoninae Salmonidae Salmonoidei Salmoniformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
GTGGGTGGAATAGTATAACAAT

miRNA*
TGTTATAGTATCCCACCTACCC

mismatches: 2
bulges: 0

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pre-miRNA
TCCTCATTAGGGTGGGTGGAATAGTATAACAATGTTGTTCCTAATGTTGTTATAGTATCCCACCTACCCTGATGTAG

dot-bracket secondary structure
....(((((((((((((((.(((.(((((((((((((....))))))))))))).))).)))))))))))))))...

SIMILARITIES

miRBase rno-mir-2985: 4e-21

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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