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Species belonging to selected taxon:

Salmo salar, Oncorhynchus mykiss, Oncorhynchus tshawytscha, Oncorhynchus nerka, Salvelinus fontinalis



ABOUT THIS RECORD

ID: MNEST006863
species: Salmo salar
miRNA family: mir-375
source: miRNEST

Taxonomy by NCBI:
Salmo salar Salmo Salmoninae Salmonidae Salmonoidei Salmoniformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGTTCGTTCGGCTCGCGT

miRNA*
 GTTGAGCCATACGCACAATACC

mismatches: 4
bulges: 1
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pre-miRNA
 ATTGATTTTCTGTATTTGCCTCACGTTGAGCCATACGCACAATACCTGAAGATGAAGTTTTGTTCGTTCGGCTCGCGTTAAGCAGGTACAGATTTTCTA

dot-bracket secondary structure
...((...(((((((((((...((((.(((((..(((.((((.((...........)).)))).)))..)))))))))...)))))))))))...))..


SIMILARITIES
miRBase fru-mir-375: 2e-26

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-375: 2e-21		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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