ABOUT THIS RECORDspecies: Festuca pratensis
miRNA family: MIRf89
source: miRNEST
Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGGACCTTTAGTCCCGGTTT miRNA* ACCGGGACTAAAGGCTATTTCG mismatches: 3 bulges: 1 |
pre-miRNA
GCGCCTGGGCGAAGGACCTTTAGTCCCGGTTTGTGTCCCCAACCGGGACTAAAGGCTATTTCGTTAATTTT
dot-bracket secondary structure
.......(((((((..(((((((((((((((.........)))))))))))))))...)))))))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCGCCTGGGCGAAGGACCTTTAGTCCCGGTTTGTGTCCCCAACCGGGACTAAAGGCTATTTCGTTAATTTT
dot-bracket secondary structure
.......(((((((..(((((((((((((((.........)))))))))))))))...)))))))......
SIMILARITIES| miRBase tae-MIR1117: 0.00001 PMRD osa-miRf11888-akr: 0.0000000008 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
