miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Lolium perenne



ABOUT THIS RECORD

ID: MNEST000690
species: Festuca pratensis
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTGTACTCCCTCCGTCCCGT

miRNA*
 GGGATTGAGGGAGTACTTATA

mismatches: 5
bulges: 0
View larger
pre-miRNA
 GCCATATAATTGTTTGTACTCCCTCCGTCCCGTCGAACTTTTAGGCTTTCAAAATTCAGATGTATCTGATGATATGTAGTGTCTGCGTACATTCCAAATT
TTAAACAAATTTATGGGGATTGAGGGAGTACTTATAGATATGCAG

dot-bracket secondary structure
((.((((..((((..((((((((((.(((((...(((.(((.(.....).))).))).((((((..((..(((((...)))))..))))))))..(((((
(.....))))))...))))).))))))))))..))))))))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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