miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Caenorhabditis elegans, Heterorhabditis bacteriophora, Caenorhabditis japonica, Caenorhabditis brenneri, Caenorhabditis remanei



ABOUT THIS RECORD

ID: MNEST006901
species: Caenorhabditis elegans
miRNA family: mir-4077
source: miRNEST

Taxonomy by NCBI:
Caenorhabditis elegans Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAGTTGGAATTTGAATGAATT

miRNA*
 CTCTTCCAGATTTTCAGCTTTT

mismatches: 4
bulges: 1
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pre-miRNA
 TTTCCACATCAACTCTTCCAGATTTTCAGCTTTTCCAGACTTTCCGGCTAACTTGATGAGCTCATCGAAAATTGAAAAGAACGTCGAAGTTGGAATTTGA
ATGAATTGATGAATTT

dot-bracket secondary structure
......((((((.((...(((((((.(((((((....(((.(((.((((.........))))..((((...))))...))).))))))))))))))))).
..)).)))))).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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