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Species belonging to selected taxon:

Caenorhabditis elegans, Heterorhabditis bacteriophora, Caenorhabditis japonica, Caenorhabditis brenneri, Caenorhabditis remanei



ABOUT THIS RECORD

ID: MNEST006905
species: Caenorhabditis elegans
miRNA family: mir-354
source: miRNEST

Taxonomy by NCBI:
Caenorhabditis elegans Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACCTTGTTTGTTGCTGCTCCT

miRNA*
 GTGCGGCTGCAGACGGGTAT

mismatches: 3
bulges: 1
View larger
pre-miRNA
 CTAAGCACCTTGGTGCGGCTGCAGACGGGTATCCGGCTCGACGTTCATACATCACGACTTCTTTCCTTTTACCTTGTTTGTTGCTGCTCCTATTGGTTTT


dot-bracket secondary structure
......(((..((.(((((.(((((((((((...((...((.(((..........))).))...))...)))).))))))).))))).))....)))...



SIMILARITIES
miRBase cel-mir-354: 5e-52

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-354: 7e-27		most similar mature miRNAs

Identical with: cel-mir-354 from miRBase (MNEST038379)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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