miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Caenorhabditis elegans, Ancylostoma caninum, Heterorhabditis bacteriophora, Caenorhabditis japonica, Caenorhabditis brenneri, Strongyloides ratti, Caenorhabditis remanei, Nippostrongylus brasiliensis, Strongyloides stercoralis, Ancylostoma ceylanicum



ABOUT THIS RECORD

ID: MNEST006907
species: Caenorhabditis elegans
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Caenorhabditis elegans Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GATGCTGCTGCTGCTGCTGAA

miRNA*
 CAGAAGGAGCAGCAGTACAAG

mismatches: 5
bulges: 0
View larger
pre-miRNA
 TCGGAAAGTCGTCAGAAGGAGCAGCAGTACAAGAGGAAGTTGTGAAGGGAGATAAAGTAATTGAAAAACCTAAAAGAAGAAAGTATGATCCAAAAAAAAA
GGCTGAAGAAGAGAAGGCAGCTGATGCTGCTGCTGCTGCTGAAGAAGTTGCA

dot-bracket secondary structure
....((..((.((((.((.((((((((((.....(((..(((((.(((......((....))......)))............)))))))).........
(((((............)))))..)))))))))).)).)))).))..))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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