miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000692
species: Festuca pratensis
miRNA family: MIR2504
source: miRNEST

Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGACCAAGCTTATAGAAAAA

miRNA*
TTTCTAAAGACTTGGTCAATT

mismatches: 0
bulges: 2

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pre-miRNA
TTCTTTGTTACTACTTCTGTTCCGTGATATAAAGGCGTATAATTTTTTCCTGAAGTCAAACGATGTAGAGTTTGACCAAGCTTATAGAAAAATCTATTGA
GAACTATGATACTATATAGATATAATATGAACATGTATGTCATGATGTATCTAATTAAATTGATTTACCATGATAGTAGTTTTTTCTAAAGACTTGGTCA
ATT
TTTTCATAATTTGACTTTTGAAAAAATGTATACGCCTTATTTTATGGAACGGAGGTAGTACTGTTTTG


dot-bracket secondary structure
........(((((((((((((((((((.((((.((((((((((((((((..(((((((((..(((.((((.((((((((((((.((((((((.((((((.
.......(((..((..((((((((.(((((.........))))).))))))))..)).....)))........)))))).))))))))))).))))))))
).)
))).)))..))))))))).)))))))).)))))))))))).)))))))))))))))))))........



SIMILARITIES
miRBase osa-MIR437: 0.0009

PMRD bdi-miR2504b: 0.00001

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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