miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Mus musculus
,
Sus scrofa
,
Bos taurus
,
Rattus norvegicus
,
Gallus gallus
,
Canis lupus familiaris
,
Ovis aries
,
Macaca fascicularis
,
Anolis carolinensis
,
Trichosurus vulpecula
,
Papio anubis
,
Homo sapiens
,
Taeniopygia guttata
,
Peromyscus maniculatus bairdii
,
Pongo abelii
,
Ursus americanus
,
Equus caballus
,
Oryctolagus cuniculus
,
Macaca nemestrina
,
Cavia porcellus
,
Bos indicus
,
Meleagris gallopavo
,
Lonchura striata domestica
,
Bos sp.
,
Macropus eugenii
,
Peromyscus polionotus subgriseus
,
Capra hircus
,
Pan troglodytes verus
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST006938
species:
Canis lupus familiaris
miRNA family:
mir-1195
source:
miRNEST
Taxonomy by NCBI:
Canis lupus familiaris
Canis lupus
Canis
Canidae
Caniformia
Carnivora
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGTTCGAGGCCAGCCTGGT
miRNA*
TTAGCTTGGTACGAGCTCGGA
mismatches:
3
bulges:
2
View larger
pre-miRNA
ACGTTAAC
TTAGCTTGGTACGAGCTCGGA
TCCACTAGTCCAGTGTGGTGGGGCGCATGCCTTTAATCCCAGCACTTGGGAAGCAGTGTCTCAGGCGGATT
TC
TGAGTTCGAGGCCAGCCTGGT
CTACAAAGT
dot-bracket secondary structure
..((..((
(..(((.(((.((((((((((
(((.((...(((...)))((((((((.(((......(((((.....))))).))))))))))))).)))..
))
))))))))..))))))..)))
..)).....
SIMILARITIES
miRBase
mmu-mir-1935
:
0.00000000003
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
7SK: 0.000007
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record