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Species belonging to selected taxon:

Fragaria vesca, Fragaria x ananassa



ABOUT THIS RECORD

ID: MNEST000697
species: Fragaria vesca
miRNA family: miR157d
source: miRNEST

Taxonomy by NCBI:
Fragaria vesca Fragaria Potentilleae Rosodae Rosoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCTCTCTATGCTTCTGTCATC

miRNA*
 TGACAGAAGATAGAGAGCAC

mismatches: 1
bulges: 1
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pre-miRNA
 ATGTTGTTGACAGAAGATAGAGAGCACAGATGGATGACTTGCAATGAATATGCATCTCACTCCTTTGTGCTCTCTATGCTTCTGTCATCACCT

dot-bracket secondary structure
....((.(((((((((((((((((((((((.((((((..((((.......))))..))).))))))))))))))))).))))))))).))...


SIMILARITIES
miRBase ptc-MIR156j: 9e-26

PMRD ptc-miR156j: 9e-26

microPC miR157: 1e-40		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: miR157 from microPC (MNEST046830)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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