miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Danio rerio, Ictalurus punctatus, Pimephales promelas, Ictalurus furcatus, Cyprinus carpio, Misgurnus anguillicaudatus, Rutilus rutilus

ABOUT THIS RECORD

ID: MNEST007021
species: Ictalurus punctatus
miRNA family: miR-1814c
source: miRNEST

Taxonomy by NCBI:
Ictalurus punctatus Ictalurus Ictaluridae Siluriformes Siluriphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
GGTTTGTTTGGGTTTTTTTTT

miRNA*
AACAAAACTCTGCTGAACTCA

mismatches: 4
bulges: 0

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pre-miRNA
TCAGGTGTCTGGGTTTGTTTGGGTTTTTTTTTTTTCTTGATTAGAACAAAACTCTGCTGAACTCAAAAACGTG

dot-bracket secondary structure
....((...((((((((...(((((((.((((.((...))..)))).)))))))...))))))))...))...

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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