ABOUT THIS RECORDspecies: Ovis aries
miRNA family: mir-544
source: miRNEST
Taxonomy by NCBI:
Ovis aries Ovis Caprinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AATCTGCATTTTTAACAAGAT miRNA* CTTGTTAGAAATGCAGAAGTT mismatches: 4 bulges: 0 |
pre-miRNA
CCAGAAATGCAGCTTGTTAGAAATGCAGAAGTTTTGGCCATGCCCCAGACCTTCTGAATCTGCATTTTTAACAAGATCTGTAGGTG
dot-bracket secondary structure
.......((((((((((((((((((((((......(((...))).((((...))))..)))))))))))))))))..)))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCAGAAATGCAGCTTGTTAGAAATGCAGAAGTTTTGGCCATGCCCCAGACCTTCTGAATCTGCATTTTTAACAAGATCTGTAGGTG
dot-bracket secondary structure
.......((((((((((((((((((((((......(((...))).((((...))))..)))))))))))))))))..)))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM mir-544: 0.00002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
