ABOUT THIS RECORDspecies: Ovis aries
miRNA family: mir-1898
source: miRNEST
Taxonomy by NCBI:
Ovis aries Ovis Caprinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGTCAAGGTTCACAGGGGATC miRNA* ATAATCTGTTTACTTTGACCTAA mismatches: 4 bulges: 1 |
pre-miRNA
TTTTTTTAAGTTTACTGATTTAAATGAACACAGGTCAAGGTTCACAGGGGATCAAGAACAATTATTCTTGTATAATCTGTTTACTTTGACCTAAAATATC
AGCTTTTAAATACTAACCCTGG
dot-bracket secondary structure
(((.((((((((....)))))))).)))...((((((((((..(((((..((((((((......)))))).))..)))))..))))))))))......((
((...(((.....)))..))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
TTTTTTTAAGTTTACTGATTTAAATGAACACAGGTCAAGGTTCACAGGGGATCAAGAACAATTATTCTTGTATAATCTGTTTACTTTGACCTAAAATATC
AGCTTTTAAATACTAACCCTGG
dot-bracket secondary structure
(((.((((((((....)))))))).)))...((((((((((..(((((..((((((((......)))))).))..)))))..))))))))))......((
((...(((.....)))..))))
SIMILARITIES| miRBase mmu-mir-1898: 5e-28 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
