ABOUT THIS RECORDspecies: Branchiostoma floridae
miRNA family: miR-2073
source: miRNEST
Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCCTGGGTACCATCCTCCATA miRNA* AAGAGGATGTTAACGGTCTA mismatches: 5 bulges: 1 |
pre-miRNA
AAGTCTCTGTCACACACTCTAGCCTGGGTACCATCCTCCATAGTAAGCTCAGCTGGCTCAATCTTTTCATAAATAGCAACCGAAAAGATTGAGCCAGCAA
TTGCTAAAGAGGATGTTAACGGTCTACGGTGACCATGTGTCTAC
dot-bracket secondary structure
..........((((((((.(((.(((..((.(((((((..((((((.....(((((((((((((((((.............)))))))))))))))))..
))))))..))))))).)).))).))).))))....)))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAGTCTCTGTCACACACTCTAGCCTGGGTACCATCCTCCATAGTAAGCTCAGCTGGCTCAATCTTTTCATAAATAGCAACCGAAAAGATTGAGCCAGCAA
TTGCTAAAGAGGATGTTAACGGTCTACGGTGACCATGTGTCTAC
dot-bracket secondary structure
..........((((((((.(((.(((..((.(((((((..((((((.....(((((((((((((((((.............)))))))))))))))))..
))))))..))))))).)).))).))).))))....)))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
