miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000715
species: Glycine soja
miRNA family: MIRf592
source: miRNEST

Taxonomy by NCBI:
Glycine soja Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGCAAGTTGGCCTTGGCTATA

miRNA*
 CAGCCAAGGATGACTTGCCGG

mismatches: 2
bulges: 0
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pre-miRNA
 CCTAAGAAGAACTTGCACGAAGAGGCAGAGAGTGTAGTGCAGCCAAGGATGACTTGCCGGCATTAGCCAAGTGAATGAGCATCATATATATATATATATA
TATATATGACTCATGTTCTTGTCGGCAAGTTGGCCTTGGCTATATTGGACTCTCTTCTTTTCATGTAAGTGCCACAATTA

dot-bracket secondary structure
..........(((((((.(((((((.(((((((.(((((.((((((((.(((((((((((((..(((.......(((((..((((((((((((....)))
)))))))))))))))))..))))))))))))).)))))))).))))).)))))))))))))).)))))))..........


SIMILARITIES
miRBase mtr-MIR169b: 0.00000000004

PMRD gso-miR169a: 3e-18

microPC miR169: 3e-18		UniProt no hits

RFAM MIR169_2: 0.00000000005		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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