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Species belonging to selected taxon:
Glycine soja
,
Glycine max
ABOUT THIS RECORD
ID:
MNEST000716
species:
Glycine soja
miRNA family:
MIR169
source:
miRNEST
Taxonomy by NCBI:
Glycine soja
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGCCAAGGATGACTTGCCGG
miRNA*
GGCAAGTTGGCCTTGGCTATA
mismatches:
2
bulges:
0
View larger
pre-miRNA
ACCTAAGAAGAACTTGCACGAAGAGGCAGAGAGTGTAGTG
CAGCCAAGGATGACTTGCCGG
CATTAGCCAAGTGAATGAGCATCATATATATATATATAT
ATATATATGACTCATGTTCTTGTC
GGCAAGTTGGCCTTGGCTATA
TTGGACTCTCTTCTTTTCATGTAAGTGCCACAATTAG
dot-bracket secondary structure
..((((.....(((((((.(((((((.(((((((.(((((
.((((((((.(((((((((((
((..(((.......(((((..((((((((((((....))
))))))))))))))))))..))))
))))))))).)))))))).))
))).)))))))))))))).))))))).......))))
SIMILARITIES
miRBase
mtr-MIR169b
:
0.00000000004
PMRD
gso-miR169a
:
3e-18
microPC
miR169
:
3e-18
UniProt
no hits
RFAM
MIR169_2: 0.00000000005
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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