miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Glycine soja, Phaseolus acutifolius, Phaseolus coccineus, Cajanus cajan, Glycine max, Vigna unguiculata, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000716
species: Glycine soja
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Glycine soja Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGCCAAGGATGACTTGCCGG

miRNA*
 GGCAAGTTGGCCTTGGCTATA

mismatches: 2
bulges: 0
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pre-miRNA
 ACCTAAGAAGAACTTGCACGAAGAGGCAGAGAGTGTAGTGCAGCCAAGGATGACTTGCCGGCATTAGCCAAGTGAATGAGCATCATATATATATATATAT
ATATATATGACTCATGTTCTTGTCGGCAAGTTGGCCTTGGCTATATTGGACTCTCTTCTTTTCATGTAAGTGCCACAATTAG

dot-bracket secondary structure
..((((.....(((((((.(((((((.(((((((.(((((.((((((((.(((((((((((((..(((.......(((((..((((((((((((....))
))))))))))))))))))..))))))))))))).)))))))).))))).)))))))))))))).))))))).......))))


SIMILARITIES
miRBase mtr-MIR169b: 0.00000000004

PMRD gso-miR169a: 3e-18

microPC miR169: 3e-18		UniProt no hits

RFAM MIR169_2: 0.00000000005		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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