ABOUT THIS RECORDspecies: Aedes aegypti
miRNA family: mir-1322
source: miRNEST
Taxonomy by NCBI:
Aedes aegypti Stegomyia Aedes Aedes/Ochlerotatus group Culicini Culicinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTACTGCTGCTGATGCTGAT miRNA* CGGCATCGAGCAGAGGCTG mismatches: 3 bulges: 2 |
pre-miRNA
CCATGGTCCAGCCGGCATCGAGCAGAGGCTGCAGCTGTTCCTTGCGCTGGTCCTCAGTTAGTTTTACGACCATTTTTCGCTTCTTGGCTGACGCTGAAAC
CGGTGAAACTGATTGTGTAGTCGATCCGATGGAACTAGCACTACTGCTACTGCTGCTGATGCTGATATGCAACTG
dot-bracket secondary structure
....(((.((..(((((((((((((.(((....((((((((...((..((((..(((((((((((...(((..((((.((.((......)).)).)))).
.)))))))))))))).......))))))..))))).)))......))).)))))..))))))))...))..))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CCATGGTCCAGCCGGCATCGAGCAGAGGCTGCAGCTGTTCCTTGCGCTGGTCCTCAGTTAGTTTTACGACCATTTTTCGCTTCTTGGCTGACGCTGAAAC
CGGTGAAACTGATTGTGTAGTCGATCCGATGGAACTAGCACTACTGCTACTGCTGCTGATGCTGATATGCAACTG
dot-bracket secondary structure
....(((.((..(((((((((((((.(((....((((((((...((..((((..(((((((((((...(((..((((.((.((......)).)).)))).
.)))))))))))))).......))))))..))))).)))......))).)))))..))))))))...))..))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|O76454|PHS_DROME: 0.000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
