miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000724
species: Glycyrrhiza uralensis
miRNA family: MIR1171
source: miRNEST

Taxonomy by NCBI:
Glycyrrhiza uralensis Glycyrrhiza Galegeae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTAGTGGAGTGGAGTGGAGT

miRNA*
 TCCCTAAACTCCCCTACGGC

mismatches: 3
bulges: 1
View larger
pre-miRNA
 GGACTTCATTAACTCCCTAAACTCCCCTACGGCACCGATCCCCTCAACCGCCACGTGGTGGAAGACGATAGATAAGTACATATGGCTGAAGTGGTATCCC
GTTTTCCGTGTTCTCTGAGATTGAGATAAGTAACTGTAGTGGAGTGGAGTGGAGTGGTGTAGTCA

dot-bracket secondary structure
.((((.(((((.((((((..(((((.((((((.((..(((...((((((((...)))))((((((((...((((....(((.........))).)))).)
)))))))....(((...))).))))))..))..)))))).)))))..)).))))))))).)))).


SIMILARITIES
miRBase cre-MIR1171: 0.0005

PMRD cre-miR1171: 0.0005

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;