miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000726
species: Glycyrrhiza uralensis
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Glycyrrhiza uralensis Glycyrrhiza Galegeae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCCACAGCTTTCTTGAACTG

miRNA*
 GTTCAATAAAGCTGTGGGAAG

mismatches: 1
bulges: 0
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pre-miRNA
 TTCAATATCATATGGCCCTCTTTGTATTCTTCCACAGCTTTCTTGAACTGCATTCAAAGAGTTCCTTTGCATGCATGCCATGGCACTCTTGCTCCCACCA
CACCTTGTTTTGCAGTTCAATAAAGCTGTGGGAAGATACAGATAGGGTCAACCATAACGGA

dot-bracket secondary structure
............(((((((.((((((((.((((((((((((.((((((((((..((((((((.((...(((....)))...)).)))))...........
....)))...)))))))))).)))))))))))).)))))))).))))))).((.....)).


SIMILARITIES
miRBase gma-MIR396a: 1e-53

PMRD gma-miR396a: 1e-53

microPC miR396: 7e-34		UniProt no hits

RFAM MIR396: 0.00000000000001		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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