miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Danio rerio, Pimephales promelas, Cyprinus carpio, Misgurnus anguillicaudatus, Rutilus rutilus



ABOUT THIS RECORD

ID: MNEST007294
species: Pimephales promelas
miRNA family: mir-208
source: miRNEST

Taxonomy by NCBI:
Pimephales promelas Pimephales Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATAAGAAGAGCAAAAAGCACA

miRNA*
 TGCTATTTCCTTTTCTTACTG

mismatches: 5
bulges: 0
View larger
pre-miRNA
 AAACCGCAGCAATAAGAAGAGCAAAAAGCACACACAGAGACGTTGCACTCTTTTATAGCGATACACGCGTACAGCCCCCCGTGATGTGAATGCACTCAAG
GTCACACATACACGCATACACTACTGTAGCATCACACATACACACGCGCATGCTATTTCCTTTTCTTACTGCCACTTGT

dot-bracket secondary structure
........(((.(((((((((.(((.((((.....(((((.((...)))))))..((....))..(((((..........(((((((..((((.......
.............))))(((....))).)))))))........)))))..)))).))).))))))))).))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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