miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aplysia californica, Lottia gigantea, Crassostrea gigas, Biomphalaria glabrata, Mytilus californianus, Euprymna scolopes, Lymnaea stagnalis

ABOUT THIS RECORD

ID: MNEST007304
species: Aplysia californica
miRNA family: miR-1814
source: miRNEST

Taxonomy by NCBI:
Aplysia californica Aplysia Aplysiidae Aplysioidea Aplysiomorpha Opisthobranchia Euthyneura Heterobranchia Apogastropoda Orthogastropoda Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
GGGTTGTTTTGTTTTGTTTTT

miRNA*
NAATGAAGACTGAACAACTCAT

mismatches: 3
bulges: 1

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pre-miRNA
CTTTGAAATGTGGGTTGTTTTGTTTTGTTTTTGTGATTATGCAANAATGAAGACTGAACAACTCATGCCTTTTT

dot-bracket secondary structure
.........(((((((((((..(((((((.((((......)))).)))))))...)))))))))))........

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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