miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aplysia californica, Lottia gigantea, Crassostrea gigas, Biomphalaria glabrata, Mytilus californianus, Euprymna scolopes, Lymnaea stagnalis



ABOUT THIS RECORD

ID: MNEST007317
species: Aplysia californica
miRNA family: miR-1814c
source: miRNEST

Taxonomy by NCBI:
Aplysia californica Aplysia Aplysiidae Aplysioidea Aplysiomorpha Opisthobranchia Euthyneura Heterobranchia Apogastropoda Orthogastropoda Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTTGTTTGGGTTTTTTTTC

miRNA*
 AAAGGAAATTGACAGGGACC

mismatches: 3
bulges: 1
View larger
pre-miRNA
 AAGGTACTAAGTTTTTGTTTGGGTTTTTTTTCTAACTTTGAATAATCTGTCTTGTTGTCATTAAGGTAGCTTTTGTGCCTACTTTTGGGCAAAGGTTAAG
AAAAGGAAATTGACAGGGACCTAGAAATA

dot-bracket secondary structure
......(((.(((((((((....((((((((((.((((((((((((.......)))))..)))))))((((((..(((((......))))))))))).))
))))))))...))))))))).))).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;