ABOUT THIS RECORDspecies: Aplysia californica
miRNA family: mir-631
source: miRNEST
Taxonomy by NCBI:
Aplysia californica Aplysia Aplysiidae Aplysioidea Aplysiomorpha Opisthobranchia Euthyneura Heterobranchia Apogastropoda Orthogastropoda Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACCTGGCCCAGGCCTCAGCG miRNA* CTGCACCTTGGCCAGGTCAC mismatches: 4 bulges: 1 |
pre-miRNA
ACTTATGGTCCAACCTGGCCCAGGCCTCAGCGATGGCCGTGGTGTTGCTCAACATGCACACGGCACGCTGCACCTTGGCCAGGTCACCGCCAGGC
dot-bracket secondary structure
.((..((((...((((((((.(((...(((((...(((((((((((....)))))...)))))).)))))..))).)))))))).))))..))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACTTATGGTCCAACCTGGCCCAGGCCTCAGCGATGGCCGTGGTGTTGCTCAACATGCACACGGCACGCTGCACCTTGGCCAGGTCACCGCCAGGC
dot-bracket secondary structure
.((..((((...((((((((.(((...(((((...(((((((((((....)))))...)))))).)))))..))).)))))))).))))..))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q28IX8|TBA_XENTR: 0.00000000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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