miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aplysia californica, Lottia gigantea, Biomphalaria glabrata, Lymnaea stagnalis



ABOUT THIS RECORD

ID: MNEST007327
species: Aplysia californica
miRNA family: miR-526a
source: miRNEST

Taxonomy by NCBI:
Aplysia californica Aplysia Aplysiidae Aplysioidea Aplysiomorpha Opisthobranchia Euthyneura Heterobranchia Apogastropoda Orthogastropoda Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGTTGAGGGGAGCACTTTCA

miRNA*
 GAAGTGCTCATGGTTCAACAGTG

mismatches: 4
bulges: 2
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pre-miRNA
 GACCAGGAATAGAGAAGTGCTCATGGTTCAACAGTGTGTTATGCTATTATACTTTTACAACTTTGTGGCACCCACAATAAAATGTGTTAGCTCTTTGAGA
AGGGGCAATCTGGTCTTTTAACAACGCTTGAAAATGTACTGTTGAGGGGAGCACTTTCAAAAACAAAGA

dot-bracket secondary structure
.............(((((((((....(((((((((((((((.((((.((((.(((.......((((((...)))))).))).)))).)))).....((((
.(((....)))..)))).))))).............))))))))))..)))))))))............


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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