ABOUT THIS RECORDspecies: Lottia gigantea
miRNA family: miR-624
source: miRNEST
Taxonomy by NCBI:
Lottia gigantea Lottia Lottiidae Acmaeioidea Nacellina Docoglossa Eogastropoda Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGTACCAGTACCTCGTGTTT miRNA* CCATGTGGTTTCTGTGTATATTA mismatches: 4 bulges: 2 |
pre-miRNA
ATTCATCATCTAGTGAATCGGAAGTACCAGTACCTCGTGTTTGTGAACTTTGTGGGAATCTCATTCCATACACAACAGTCTTGTCTCAGCCATGTGGTTT
CTGTGTATATTACGGATTAATAGACGATAG
dot-bracket secondary structure
....(((.((((.(((.(((((.(((((((.(((.((((.(((.(((((((((((((((...)))))...))))).)))....)).))).)))).)))..
))).)))).)).))).))).)))).)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATTCATCATCTAGTGAATCGGAAGTACCAGTACCTCGTGTTTGTGAACTTTGTGGGAATCTCATTCCATACACAACAGTCTTGTCTCAGCCATGTGGTTT
CTGTGTATATTACGGATTAATAGACGATAG
dot-bracket secondary structure
....(((.((((.(((.(((((.(((((((.(((.((((.(((.(((((((((((((((...)))))...))))).)))....)).))).)))).)))..
))).)))).)).))).))).)))).)))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
