miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum

ABOUT THIS RECORD

ID: MNEST007356
species: Solanum tuberosum
miRNA family: MIR416
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
CGTTCGTACGTACACTCTTTT

miRNA*
AGGAGCATCGTACTGAGCTCA

mismatches: 4
bulges: 2

View larger

pre-miRNA
AGCATAGCTGCGTTCGTACGTACACTCTTTTCCAGAAGGAGCATCGTACTGAGCTCACTCTTTT

dot-bracket secondary structure
(((...)))..(((((((((....(((((((...)))))))...))))).))))..........

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record