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Species belonging to selected taxon:

Ipomoea batatas, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST007359
species: Solanum tuberosum
miRNA family: MIRf408
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGATGCCATGTCATCATCCAC

miRNA*
 GGATGATGATATGGTGTCTTT

mismatches: 3
bulges: 0
View larger
pre-miRNA
 TTACTTGAGCACGATGCCATGTCATCATCCACATCATCGCTACGATTGCCATATTCCTCAAAATTATCATCATCATCAATTTTAGGATGATGATATGGTG
TCTTTGGCTCGGT

dot-bracket secondary structure
....((((((..((((((((((((((((((......................................................))))))))))))))))
))....)))))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-598: 0.0004		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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