ABOUT THIS RECORDspecies: Solanum tuberosum
miRNA family: MIRf582
source: miRNEST
Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTGCTGTTGTTGCTGCAGTT miRNA* CTGCTGCTGCATTTGGTGAAT mismatches: 4 bulges: 2 |
pre-miRNA
GATCTGCTGCTGCTGCTGCTGCATTTGGTGAATCTGTTGTTGCTGCATTTGGGGAACCTGTGATTGTTGCAACGGAATCTGCTGTTGTTGCTGCAGTTGC
ATGAAAG
dot-bracket secondary structure
..((...(((.(((((.((.(((..((((((.((((((((.((..(((..((....)).)))...)).)))))))).)).)))).))).)).))))).))
).))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATCTGCTGCTGCTGCTGCTGCATTTGGTGAATCTGTTGTTGCTGCATTTGGGGAACCTGTGATTGTTGCAACGGAATCTGCTGTTGTTGCTGCAGTTGC
ATGAAAG
dot-bracket secondary structure
..((...(((.(((((.((.(((..((((((.((((((((.((..(((..((....)).)))...)).)))))))).)).)))).))).)).))))).))
).))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
