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Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii



ABOUT THIS RECORD

ID: MNEST000739
species: Gossypium arboreum
miRNA family: MIR2947
source: miRNEST

Taxonomy by NCBI:
Gossypium arboreum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATACCGTGCCCATGACTGTAG

miRNA*
 ACGTTATGGGCATGGTATGGA

mismatches: 0
bulges: 1
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pre-miRNA
 ATAAGCTTGTTAAGCGAAGTTACGTTATGGGCATGGTATGGATTGCTGTTTTTGATGATTTGTTGCTTTCATTAACAGCAAATTATACCGTGCCCATGAC
TGTAGCATCACTCGGCAGCTCTA

dot-bracket secondary structure
...((((.(((.((.((.(((((((((((((((((((((((.((((((((..(((.............)))..)))))))).))))))))))))))))))
.))))).)).)).)))))))...


SIMILARITIES
miRBase gar-MIR2947: 5e-62

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: gar-MIR2947 from miRBase (MNEST041040)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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