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Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii



ABOUT THIS RECORD

ID: MNEST000743
species: Gossypium hirsutum
miRNA family: miR2949a
source: miRNEST

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCAAATCCAGTCAAAAGTTA

miRNA*
 ACTTTTGAACTGGATTTGCCGA

mismatches: 1
bulges: 1
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pre-miRNA
 TACTGTCTTAGTTTGCGTCTTGACTTTTGAACTGGATTTGCCGACTTGAACTGCGTTGTTGATGGTTTCCAAAACCCGAGCCTGCAAATCCAGTCAAAAG
TTAAAACCGGGCTGAGATTTAC

dot-bracket secondary structure
....(((((((((((.((.(((((((((((.((((((((((((((.((.....))..))))..(((((.........))))).)))))))))))))))))
)))).)))))))))))))....


SIMILARITIES
miRBase ghr-MIR2949a: 3e-60

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: ghr-MIR2949a from miRBase (MNEST041071)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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