ABOUT THIS RECORDspecies: Alvinella pompejana
miRNA family: mir-467
source: miRNEST
Taxonomy by NCBI:
Alvinella pompejana Alvinella Alvinellidae Terebellida Scolecida Polychaeta Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATATACATGCACACACACAT miRNA* GTGGTGTATATTTATTGTGT mismatches: 5 bulges: 1 |
pre-miRNA
TTTTTTTGTGAATAAAATGTGGTGTATATTTATTGTGTTTGAATGCACACATATACATGCACACACACATCTGATACAAACTAATGCCA
dot-bracket secondary structure
....((((((......(((((((((.(((.((((((((......)))))...))).))).)))).)))))....)))))).........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
TTTTTTTGTGAATAAAATGTGGTGTATATTTATTGTGTTTGAATGCACACATATACATGCACACACACATCTGATACAAACTAATGCCA
dot-bracket secondary structure
....((((((......(((((((((.(((.((((((((......)))))...))).))).)))).)))))....)))))).........
SIMILARITIES| miRBase mmu-mir-669d: 0.00002 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
