miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Schistosoma mansoni, Schistosoma japonicum, Taenia solium, Schmidtea mediterranea



ABOUT THIS RECORD

ID: MNEST007480
species: Schistosoma mansoni
miRNA family: miR-1502c
source: miRNEST

Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAAACATTACCATGAAAAAGT

miRNA*
 TTATTCATTGAAAACGTTTATG

mismatches: 5
bulges: 1
View larger
pre-miRNA
 TTGACAGAAAGAAAGTTATCGTAAACATTACCATGAAAAAGTCTCAGAAGATTGTAGTTGTCATTGTTTCAAGTGAAACTAGGTCATCAGTGTACTTCAT
CTAATAAGAACTAAAGAGTCAGTCGATCCTTACTAAATCAAGCAAAGAAAATGTTGCATTTTGGAGCTTATTCATTGAAAACGTTTATGGAAGCG

dot-bracket secondary structure
..............(((.((((((((.((...(((((.((((.((((((((((.((((.((..(((((..(((((..(((........))).)))))...
..)))))..))..(((.(((....))).)))))))))))..((((........)))).)))))).)))).)))))....)).)))))))).))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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