ABOUT THIS RECORDspecies: Ixodes scapularis
miRNA family: mir-297
source: miRNEST
Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGTATGTTTGCATGTACGTT miRNA* CGTGCATGTCCATGCA mismatches: 3 bulges: 2 |
pre-miRNA
TACCATTAGCTATGTATGTTTGCATGTACGTTGATTTTAATGCTTTGCCCTATTTATGAGCATTTTCACCGCATCTAGCAAAGCCGCGTGGCGGAAGGGC
ACTTGGCAGCCAAAGCATGTCTCATCACGTGCATGTCCATGCA
dot-bracket secondary structure
............((((((...((((((((((.(((....((((((((((((.....((((....))))((((.....((......))...)))).)))))
)..(((...))))))))).....))))))))))))).))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TACCATTAGCTATGTATGTTTGCATGTACGTTGATTTTAATGCTTTGCCCTATTTATGAGCATTTTCACCGCATCTAGCAAAGCCGCGTGGCGGAAGGGC
ACTTGGCAGCCAAAGCATGTCTCATCACGTGCATGTCCATGCA
dot-bracket secondary structure
............((((((...((((((((((.(((....((((((((((((.....((((....))))((((.....((......))...)))).)))))
)..(((...))))))))).....))))))))))))).))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
