ABOUT THIS RECORDspecies: Arachis duranensis
miRNA family: MIR390
source: miRNEST
Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGCTCAAGAGGGATAGCGCC miRNA* AACGCTATCCATCCTGAGTTTCA mismatches: 4 bulges: 0 |
pre-miRNA
CCCTATAGAGTGGAAGAATCTGTATAGCTCAAGAGGGATAGCGCCACGAAAGCATCGGCGATGATCCGTTGTTTGTGAAGAGTTTTTATGCTCTTTGATTT
TCTGTAACGCTATCCATCCTGAGTTTCATGGGTTCTTCACACTGCTTC
dot-bracket secondary structure
).......(((((((((((((((..((((((.((.((((((((.((.(((((((.(((((......)))))..)))(((((((......)))))))..)))
).))...)))))))).)).))))))..))))))))))).)))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCCTATAGAGTGGAAGAATCTGTATAGCTCAAGAGGGATAGCGCCACGAAAGCATCGGCGATGATCCGTTGTTTGTGAAGAGTTTTTATGCTCTTTGATTT
TCTGTAACGCTATCCATCCTGAGTTTCATGGGTTCTTCACACTGCTTC
dot-bracket secondary structure
).......(((((((((((((((..((((((.((.((((((((.((.(((((((.(((((......)))))..)))(((((((......)))))))..)))
).))...)))))))).)).))))))..))))))))))).)))).....
SIMILARITIES| miRBase csi-MIR390: 3.0E-8 PMRD ghr-miR390b: 3.0E-8 microPC miR390: 0.0005 | UniProt no hits RFAM 0MIR390: 1.0E-7 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
