ABOUT THIS RECORDspecies: Ixodes scapularis
miRNA family: miR-992
source: miRNEST
Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCCTGGTTTCAGGGAGGTGTT miRNA* CTGCTTTGTTGGACCAACTTT mismatches: 5 bulges: 1 |
pre-miRNA
TTCGCTTGAAGATAGCTGGGAAAAAAAAAAAAAATCTGCTTTGTTGGACCAACTTTGCTTTCACGAGCCCCCTGGTTTCAGGGAGGTGTTTTGTTTTTGT
TGTTTTTCTTTCTTTGAGTAAT
dot-bracket secondary structure
...(((((((((.....(((((((.(((((.(((..((((((.((((((((.....((((....))))....))).))))).)))))).))).)))))..
..))))))).)))))))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTCGCTTGAAGATAGCTGGGAAAAAAAAAAAAAATCTGCTTTGTTGGACCAACTTTGCTTTCACGAGCCCCCTGGTTTCAGGGAGGTGTTTTGTTTTTGT
TGTTTTTCTTTCTTTGAGTAAT
dot-bracket secondary structure
...(((((((((.....(((((((.(((((.(((..((((((.((((((((.....((((....))))....))).))))).)))))).))).)))))..
..))))))).)))))))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
