miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Glycine soja, Phaseolus acutifolius, Phaseolus coccineus, Cajanus cajan, Glycine max, Vigna unguiculata, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST007518
species: Vigna unguiculata
miRNA family: MIR1507
source: miRNEST

Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTCATTCCATACATCGTCTG

miRNA*
 GAGGTGTATGGAGTGAGAGA

mismatches: 0
bulges: 1
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pre-miRNA
 TTTCTCAACGTAGTATTTGGCAGAGGTGTATGGAGTGAGAGAAGGGAAAAACGCCTTTGCCGATCTCATCGGTTCTTTTTTTCCTCTCTCATTCCATACA
TCGTCTGACGAACGTAGCGTTGATCG

dot-bracket secondary structure
....(((((((.((.((((.((((((((((((((((((((((.((((((((.......((((((...))))))...))))))))))))))))))))))))
)).)))).)))).)).)))))))...


SIMILARITIES
miRBase vun-MIR1507a: 1e-44

PMRD vun-miR1507a: 1e-44

microPC miR1507: 8e-30		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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