miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Vigna unguiculata



ABOUT THIS RECORD

ID: MNEST007524
species: Vigna unguiculata
miRNA family: miR319c
source: miRNEST

Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GAGCTTTCTTCAGTCCACTCA

miRNA*
 CTTGGACTGAAGGGAGCTCCC

mismatches: 3
bulges: 0
View larger
pre-miRNA
 GACCTTAACAAATGTAGGTAAGTGAGCTTTCTTCAGTCCACTCATAGGTGGCAGTAAGATTCAATTAGCTGCCGACTCATTCATCCAAATGCTGAGTAGT
GATACTCTTAAAGATACTCATCAAATGAGTGAATGATGCGGGAGACAAATTGATTCTTAAGTTTCCTGTACTTGGACTGAAGGGAGCTCCCTTTTCCTTT
CTATGTAAGAT

dot-bracket secondary structure
...((((....(((.(((.(((.(((((((((((((((((...(((((.(((..(((((.((((((..((.(((..((((((((.((..((.((((((.(
((.....)))....)))))).))..)).))))))))..))).))...)))))).))))).))).)))))...))))))))))))))))).)))..)))..
.))).))))..


SIMILARITIES
miRBase gma-MIR319a: 9e-62

PMRD gma-miR319a: 9e-62

microPC miR319: 1e-94		UniProt no hits

RFAM MIR159: 2e-44		most similar mature miRNAs

Identical with: miR319 from microPC (MNEST046740)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;