ABOUT THIS RECORDspecies: Vigna unguiculata
miRNA family: MIRf102
source: miRNEST
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGACGGAATTTTTCTTCGAC miRNA* CGAGGACAGATTTTGACAAAG mismatches: 4 bulges: 0 |
pre-miRNA
CACCACCTATATCGAGGACAGATTTTGACAAAGTACTTGCTAGACAAAGACCCACTGTAAGCAAGACCGACCTCGATGTTCATGAGAGATTCACAAAGGA
GTTCGGAGAGGAAGGATAATTCTGACGGAATTTTTCTTCGACTATATGCAC
dot-bracket secondary structure
...........(((((((.((((((((.((.(((.((((((..(((.........))).)))))).((..((((........((((...(((.....)))
.))))..))))..))...))).)).)))))))).)))))))..........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
CACCACCTATATCGAGGACAGATTTTGACAAAGTACTTGCTAGACAAAGACCCACTGTAAGCAAGACCGACCTCGATGTTCATGAGAGATTCACAAAGGA
GTTCGGAGAGGAAGGATAATTCTGACGGAATTTTTCTTCGACTATATGCAC
dot-bracket secondary structure
...........(((((((.((((((((.((.(((.((((((..(((.........))).)))))).((..((((........((((...(((.....)))
.))))..))))..))...))).)).)))))))).)))))))..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
