ABOUT THIS RECORDspecies: Macaca fascicularis
miRNA family: miR-1394
source: miRNEST
Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCCGAGGCGCCCGAGGGGCTG miRNA* GGGGTCCTTGGCCGCTTCCTGCT mismatches: 4 bulges: 2 |
pre-miRNA
TATGGAGACACAGGGGTCCTTGGCCGCTTCCTGCTTCAAGCCCGAGGCGCCCGAGGGGCTGTGCATGTGG
dot-bracket secondary structure
........(((((...(((((((.((((((..(((...)))..)))))).))))))).))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TATGGAGACACAGGGGTCCTTGGCCGCTTCCTGCTTCAAGCCCGAGGCGCCCGAGGGGCTGTGCATGTGG
dot-bracket secondary structure
........(((((...(((((((.((((((..(((...)))..)))))).))))))).))))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|P07360|CO8G_HUMAN: 0.00003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
