ABOUT THIS RECORDspecies: Macaca fascicularis
miRNA family: miR-2831
source: miRNEST
Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CACAAATAAAGCATTTGTTTC miRNA* AATGAATGCAATTGTTGTTGTT mismatches: 4 bulges: 1 |
pre-miRNA
CTCCCACACCTTCCCCTGAACCTGATACATAAAATGAATGCAATTGTTGTTGTTAACTTGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGCA
TTACAAATTTCACAAATAAAGCATTTGTTTCACTGCATTTTAATTGGGGGTTGTCCAAAC
dot-bracket secondary structure
.....(((....(((((((....(((.((..((((((((((..(((((..((..((.((((....(((.((((................))))....)))
..)))).)).))..))))).))))))))))...)).)))....))))))).)))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTCCCACACCTTCCCCTGAACCTGATACATAAAATGAATGCAATTGTTGTTGTTAACTTGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGCA
TTACAAATTTCACAAATAAAGCATTTGTTTCACTGCATTTTAATTGGGGGTTGTCCAAAC
dot-bracket secondary structure
.....(((....(((((((....(((.((..((((((((((..(((((..((..((.((((....(((.((((................))))....)))
..)))).)).))..))))).))))))))))...)).)))....))))))).)))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM SVLPA: 0.000000000000003 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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