ABOUT THIS RECORDspecies: Macaca fascicularis
miRNA family: miR-1285
source: miRNEST
Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGGGCAACATAGCCAGACTT miRNA* GAATGGCGTGAACCCGGGA mismatches: 4 bulges: 2 |
pre-miRNA
TACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCCGGCCACTGCACTCCAGCCTGGGCAACATAGCC
AGACTTCGTCTCAAAAATAAAAAAA
dot-bracket secondary structure
............((((((.((((..(((((((..((((((....((((..(((((((.((((.....)))))))))))))))..))))))...))).)))
)..))))))))))............
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCCGGCCACTGCACTCCAGCCTGGGCAACATAGCC
AGACTTCGTCTCAAAAATAAAAAAA
dot-bracket secondary structure
............((((((.((((..(((((((..((((((....((((..(((((((.((((.....)))))))))))))))..))))))...))).)))
)..))))))))))............
SIMILARITIES| miRBase ppy-mir-1273: 1e-19 PMRD ptc-miRf12524-akr: 0.0000000000001 microPC no hits | UniProt sp|Q86U02|CN165_HUMAN: 0.000000002 RFAM Metazoa_SRP: 4e-41 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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