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Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST000757
species: Gossypium hirsutum
miRNA family: MIR413
source: miRNEST

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGTTTCTCTAGTTCTGCAC

miRNA*
 TTAGGACTAGGAAACAGAAA

mismatches: 2
bulges: 1
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pre-miRNA
 CTACAGTTTAATGGCATTTAGACATCTGATGTTGGTTTCTCTAGTTCTGCACTTATTCATTTATAGATTGGAAATTTGTATCTTTGTGTTTAGGACTAGG
AAACAGAAAGGTGTTCAAAAGTTCCATTTGGCCTTGG

dot-bracket secondary structure
.....(((.(((((.((((.(((((((....((.(((((.(((((((((.((.....((..((((((((...))))))))....)).)).))))))))))
)))).)).)))))))...)))).))))).))).....


SIMILARITIES
miRBase no hits

PMRD ghr-miR413: 2e-37

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: ghr-miR413 from PMRD (MNEST048516)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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