ABOUT THIS RECORDspecies: Macaca fascicularis
miRNA family: miR-1285
source: miRNEST
Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGGGCAACAGAGCGAGACTC miRNA* GTCTCGCTCTGTCGCCCAGGC mismatches: 1 bulges: 0 |
pre-miRNA
TTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTAGAGTGAGCTGAGATTGCACCACTGCACTCCAGTCTGGGCAACAGAGCGAGACTCC
ATCTCTAAATAAATAAAT
dot-bracket secondary structure
)..(((.(((.(((.((((.(((((((((((((((.(((((((((.(((((((.((.........)))).))))).))))))))).)))))))))))))))
.)))).))).))).))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTAGAGTGAGCTGAGATTGCACCACTGCACTCCAGTCTGGGCAACAGAGCGAGACTCC
ATCTCTAAATAAATAAAT
dot-bracket secondary structure
)..(((.(((.(((.((((.(((((((((((((((.(((((((((.(((((((.((.........)))).))))).))))))))).)))))))))))))))
.)))).))).))).))).
SIMILARITIES| miRBase hsa-mir-1273: 4.0E-7 PMRD no hits microPC no hits | UniProt no hits RFAM PMetazoa_SRP: 2.0E-21 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
