ABOUT THIS RECORDspecies: Macaca fascicularis
miRNA family: mir-1268
source: miRNEST
Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGGCGTGGTGGCGGGCGCCT miRNA* GCATGCGCCCCCATGCCCAGC mismatches: 5 bulges: 0 |
pre-miRNA
ACGTGAAACCCCGTCTCTACTAAAAATACAAGAAGATTGGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCTCAACCTCCTGAGTAGCTGGGATTGCGGGCA
TGCGCCCCCATGCCCAGCTGGTTTTTGTGTTTTTAGTGGAGACGGGG
dot-bracket secondary structure
........(((((((((((((((((((((((((..((((((.((((((((.((((...((((((((((((.................)))))))))))).
..)))).)))))))).)))))))))))))))))))))))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACGTGAAACCCCGTCTCTACTAAAAATACAAGAAGATTGGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCTCAACCTCCTGAGTAGCTGGGATTGCGGGCA
TGCGCCCCCATGCCCAGCTGGTTTTTGTGTTTTTAGTGGAGACGGGG
dot-bracket secondary structure
........(((((((((((((((((((((((((..((((((.((((((((.((((...((((((((((((.................)))))))))))).
..)))).)))))))).)))))))))))))))))))))))))))))))
SIMILARITIES| miRBase ppy-mir-1268: 0.0000001 PMRD no hits microPC no hits | UniProt no hits RFAM Metazoa_SRP: 4e-17 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
