ABOUT THIS RECORDspecies: Macaca fascicularis
miRNA family: mir-1285
source: miRNEST
Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTGGGCGACAAAGTGAGTCT miRNA* AATCTCTTGAGCCTGGGAA mismatches: 4 bulges: 2 |
pre-miRNA
ACTGAGGCAGGAGAATCTCTTGAGCCTGGGAAGCAGAGGTTGTAGTGAGCCACCATCATGCCACTGCACTCCAATCTGGGCGACAAAGTGAGTCTCCATCT
CAA
dot-bracket secondary structure
).(((((..(((((.((.(((..(((((((.....(((...((((((.((.........)))))))).)))...)))))))....))).)).))))).)))
)).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACTGAGGCAGGAGAATCTCTTGAGCCTGGGAAGCAGAGGTTGTAGTGAGCCACCATCATGCCACTGCACTCCAATCTGGGCGACAAAGTGAGTCTCCATCT
CAA
dot-bracket secondary structure
).(((((..(((((.((.(((..(((((((.....(((...((((((.((.........)))))))).)))...)))))))....))).)).))))).)))
)).
SIMILARITIES| miRBase ppy-mir-1273: 2.0E-8 PMRD ptc-miRf12524-akr: 5.0E-9 microPC no hits | UniProt sp|Q8N2A0|CX062_HUMAN: 2.0E-5 RFAM PMetazoa_SRP: 4.0E-16 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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