miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Macaca fascicularis, Papio anubis, Homo sapiens, Peromyscus maniculatus bairdii, Pongo abelii, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Peromyscus polionotus subgriseus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST007585
species: Macaca fascicularis
miRNA family: mir-1285
source: miRNEST

Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTGGGCGACAAAGTGAGTCT

miRNA*
 AATCTCTTGAGCCTGGGAA

mismatches: 4
bulges: 2
View larger
pre-miRNA
 CTGAGGCAGGAGAATCTCTTGAGCCTGGGAAGCAGAGGTTGTAGTGAGCCACCATCATGCCACTGCACTCCAATCTGGGCGACAAAGTGAGTCTCCATCT
CAA

dot-bracket secondary structure
.(((((..(((((.((.(((..(((((((.....(((...((((((.((.........)))))))).)))...)))))))....))).)).))))).)))
)).


SIMILARITIES
miRBase ppy-mir-1273: 0.00000002

PMRD ptc-miRf12524-akr: 0.000000005

microPC no hits		UniProt sp|Q8N2A0|CX062_HUMAN: 0.00002

RFAM Metazoa_SRP: 4e-16		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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