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Species belonging to selected taxon:

Macaca fascicularis, Papio anubis, Homo sapiens, Pongo abelii, Macaca nemestrina, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST007593
species: Macaca fascicularis
miRNA family: mir-548
source: miRNEST

Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAAAAGTAATTGTGGTTTTTG

miRNA*
 AAACTACAATTACTTTTGCA

mismatches: 1
bulges: 0
View larger
pre-miRNA
 CAACATATATTAAGTTGGTGCAAAAGTAATTGTGGTTTTTGCCGTGACTTTGAATGGTAAAACTACAATTACTTTTGCACCAACCTAATAATTTA

dot-bracket secondary structure
.......(((((.((((((((((((((((((((((((((.(((((........))))))))))))))))))))))))))))))).))))).....


SIMILARITIES
miRBase hsa-mir-548aa-2: 2e-17

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-548: 1e-19		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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