ABOUT THIS RECORDspecies: Macaca fascicularis
miRNA family: mir-650
source: miRNEST
Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGAAGGCAGCGCTCTCGGGAC miRNA* CCTGGGCTCTGCTCCTCCTCA mismatches: 4 bulges: 2 |
pre-miRNA
GCTGGGGTCTCAGAAGGCAGCGCTCTCGGGACATCTCCACCATGGCCTGGGCTCTGCTCCTCCTCACCCTCCTC
dot-bracket secondary structure
...(((((...((.(((.((((..((((((.(((.......))).))))))...))))))).)).)))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCTGGGGTCTCAGAAGGCAGCGCTCTCGGGACATCTCCACCATGGCCTGGGCTCTGCTCCTCCTCACCCTCCTC
dot-bracket secondary structure
...(((((...((.(((.((((..((((((.(((.......))).))))))...))))))).)).)))))....
SIMILARITIES| miRBase mml-mir-650b: 2e-29 PMRD no hits microPC no hits | UniProt no hits RFAM mir-650: 1e-24 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
